Yıl: 2022 Cilt: 28 Sayı: 6 Sayfa Aralığı: 709 - 715 Metin Dili: İngilizce DOI: 10.9775/kvfd.2022.27881 İndeks Tarihi: 15-05-2023

The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes

Öz:
Bovine viral diarrhea virus (BVDV) is a viral pathogen that causes significant economic losses in cattle, especially by causing abortions. Globally, BVDVs are classified into three genetically distinct types: BVDV-1, BVDV-2 and BVDV-3. Despite the presence of all three groups in Türkiye, BVDV-1 is by far the most prevalent. The aim of the study was to determine the genetic diversity of BVDV detected in materials from aborted fetus between 2017 and 2020 in western Türkiye. Sequence and phylogenetic analyzes were performed based on the 5’-UTR and Npro gene regions of BVDVs from samples, which tested positive using real time RT-PCR. According to pairwise similarity and cluster analysis the samples clustered into three different sub-types, with one dominant subtype 1d (n=4). The remaining samples clustered within subtype 1l (n=3) and 1f (n=2). In this study, different subtypes were found in abortion materials submitted from the same region. Since different subtypes of BVDV were identified even in a small geographical area of Türkiye, it is essential to prepare control and eradication programs through specific vaccination, diagnostic and mitigation programs coordinated by national government, to prevent the spread of these viruses.
Anahtar Kelime:

Türkiye’nin Batısında Sığır Viral Diyare Virusunun (BVDV) Durumu: Üç Alt Grubun Tespiti

Öz:
Bovine viral diyare virusu (BVDV), sığırlarda özellikle abortların görülmesiyle birlikte önemli ekonomik kayıplara neden olan viral bir patojendir. Küresel olarak, BVDV genetik olarak BVDV-1, BVDV-2 ve BVDV-3 olmak üzere farklı üç tipte sınıflandırılır. Türkiye’de her üç grubun varlığına rağmen, BVDV-1 açık ara en yaygın olanıdır. Bu çalışmanın amacı, Türkiye’nin batısında 2017-2020 yılları arasında sığırlardan elde edilen abort materyallerinde tespit edilen BVDV’nin genetik çeşitliliğini belirlemektir. Real Time RT-PCR kullanılarak pozitif test edilen abort örneklerinin 5’-UTR ve Npro gen bölgelerine dayalı olarak dizi ve filogenetik analizleri yapıldı. İkili benzerlik ve küme analizine göre örnekler, bir baskın alt tip 1d (n=4) ile üç farklı alt tipte kümelendi. Kalan örnekler 1l (n=3) ve 1f (n=2) alt tipinde kümelenmiştir. Bu çalışmada aynı bölgeden gönderilen abort materyallerinde farklı alt tipler bulunmuştur. Türkiye’nin küçük bir coğrafi bölgesinde bile BVDV’nin farklı alt tipleri tespit edildiğinden, bu virusların yayılmasını önlemek için ulusal hükümet tarafından koordine edilen spesifik aşılama, teşhis ve hafifletme programları ile kontrol ve eradikasyon programlarının hazırlanması esas olmalıdır.
Anahtar Kelime:

Belge Türü: Makale Makale Türü: Araştırma Makalesi Erişim Türü: Erişime Açık
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APA CAGIRGAN A, KAPLAN M, pekmez k, VAN SCHALKWYK A, ARSLAN F, Timurkan M (2022). The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. , 709 - 715. 10.9775/kvfd.2022.27881
Chicago CAGIRGAN Abdurrahman Anil,KAPLAN MURAT,pekmez kemal,VAN SCHALKWYK ANTOINETTE,ARSLAN Fatih,Timurkan Mehmet Ozkan The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. (2022): 709 - 715. 10.9775/kvfd.2022.27881
MLA CAGIRGAN Abdurrahman Anil,KAPLAN MURAT,pekmez kemal,VAN SCHALKWYK ANTOINETTE,ARSLAN Fatih,Timurkan Mehmet Ozkan The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. , 2022, ss.709 - 715. 10.9775/kvfd.2022.27881
AMA CAGIRGAN A,KAPLAN M,pekmez k,VAN SCHALKWYK A,ARSLAN F,Timurkan M The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. . 2022; 709 - 715. 10.9775/kvfd.2022.27881
Vancouver CAGIRGAN A,KAPLAN M,pekmez k,VAN SCHALKWYK A,ARSLAN F,Timurkan M The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. . 2022; 709 - 715. 10.9775/kvfd.2022.27881
IEEE CAGIRGAN A,KAPLAN M,pekmez k,VAN SCHALKWYK A,ARSLAN F,Timurkan M "The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes." , ss.709 - 715, 2022. 10.9775/kvfd.2022.27881
ISNAD CAGIRGAN, Abdurrahman Anil vd. "The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes". (2022), 709-715. https://doi.org/10.9775/kvfd.2022.27881
APA CAGIRGAN A, KAPLAN M, pekmez k, VAN SCHALKWYK A, ARSLAN F, Timurkan M (2022). The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. Kafkas Üniversitesi Veteriner Fakültesi Dergisi, 28(6), 709 - 715. 10.9775/kvfd.2022.27881
Chicago CAGIRGAN Abdurrahman Anil,KAPLAN MURAT,pekmez kemal,VAN SCHALKWYK ANTOINETTE,ARSLAN Fatih,Timurkan Mehmet Ozkan The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. Kafkas Üniversitesi Veteriner Fakültesi Dergisi 28, no.6 (2022): 709 - 715. 10.9775/kvfd.2022.27881
MLA CAGIRGAN Abdurrahman Anil,KAPLAN MURAT,pekmez kemal,VAN SCHALKWYK ANTOINETTE,ARSLAN Fatih,Timurkan Mehmet Ozkan The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. Kafkas Üniversitesi Veteriner Fakültesi Dergisi, vol.28, no.6, 2022, ss.709 - 715. 10.9775/kvfd.2022.27881
AMA CAGIRGAN A,KAPLAN M,pekmez k,VAN SCHALKWYK A,ARSLAN F,Timurkan M The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. Kafkas Üniversitesi Veteriner Fakültesi Dergisi. 2022; 28(6): 709 - 715. 10.9775/kvfd.2022.27881
Vancouver CAGIRGAN A,KAPLAN M,pekmez k,VAN SCHALKWYK A,ARSLAN F,Timurkan M The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes. Kafkas Üniversitesi Veteriner Fakültesi Dergisi. 2022; 28(6): 709 - 715. 10.9775/kvfd.2022.27881
IEEE CAGIRGAN A,KAPLAN M,pekmez k,VAN SCHALKWYK A,ARSLAN F,Timurkan M "The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes." Kafkas Üniversitesi Veteriner Fakültesi Dergisi, 28, ss.709 - 715, 2022. 10.9775/kvfd.2022.27881
ISNAD CAGIRGAN, Abdurrahman Anil vd. "The Status of Bovine Viral Diarrhea Virus (BVDV) in Western Türkiye: Detection of Three Subtypes". Kafkas Üniversitesi Veteriner Fakültesi Dergisi 28/6 (2022), 709-715. https://doi.org/10.9775/kvfd.2022.27881