Yıl: 2018 Cilt: 28 Sayı: 5 Sayfa Aralığı: 150 - 158 Metin Dili: Türkçe İndeks Tarihi: 21-02-2020

Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran

Öz:
Phytoplasmas are insect-transmitted, phloem-inhabiting, cell wall-less prokaryotes that cause numerous diseasesin plants. A survey carried out during 2012-2013 in peach and nectarine orchards in three Northern provincesincluding Mazandaran (Sari, Neka, Babol, Behshahr and Babolsar), Golestan (Gorgan, kordkooy and Aliabad)and West Azerbaijan (Urmia, Khoy, Salmas, Oshnavieh and Makou) in Iran. A total of 103 Samples showingleaf roll, yellowing, purple colored of edges, leaf stunting and weak shoot growth symptoms were collected andtested by polymerase chain reaction (PCR) and Nested -PCR using primer pairs P1/P7, P1/Tint, PAF/PAR,R16F2n/R2, fU5/rU3 and NPA1F/NPA1R. The amplicons were purified, sequenced and the nucleotidesequences were analyzed by virtual restriction fragment length polymorphism (RFLP). The phytoplasmasassociated with the peach and nectarine yellow leaf roll (PYLR) disease were identified as members of 16SrXII(Stolbur group) and 16SrIX (pigeon pea) groups and were placed in a unique subgroup close to 16SrXII-A(Candidatus Phytoplasma solani) and another one in 16SrIX-C (Candidatus Phytoplasma phoenciium)subgroups, respectively in constructed phylogenetic trees. The present study is the first report of a new subgroupin 16SrXII and first report of 16SrIX-C subgroup phytoplasma associated with peach and nectarine from Northof Iran.
Anahtar Kelime:

Konular: Balıkçılık Su Kaynakları Bahçe Bitkileri Tarımsal Ekonomi ve Politika Ziraat Mühendisliği Gıda Bilimi ve Teknolojisi Bitki Bilimleri Ziraat, Toprak Bilimi
Belge Türü: Makale Makale Türü: Araştırma Makalesi Erişim Türü: Erişime Açık
  • Abou‐Jawdah Y, Sobh H, Akkary M. (2009) First report of Almond witches’ broom phytoplasma (‘Candidatus Phytoplasma phoenicium’) causing a severe disease on nectarine and peach trees in Lebanon. EPPO Bulletin 39: 94-98.
  • Bai XD, Zhang JH, Ewing A, Miller SA, Radek AJ, Shevchenko DV, Tsukerman K, Walunas T, Lapidus A,
  • Campbell JW. (2006) living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts. J Bacteriol 188:3682–3696.
  • Bayat H, Verhoeven TJ, Botermans M, Peters D, Hassani-Mehraban A (2013). First report of a 16SrIX group (‘Candidatus phytoplasma phoenicium’-Related) phytoplasma associated with a chrysanthemum disease. Plant Dis. 97 (8): 1110.
  • Bertaccini A, Duduk B, Paltrinieri S, Contaldo N (2014) Phytoplasmas and phytoplasma diseases: a severe threat to agriculture. American J Plant Sci. 5:1763-1788.
  • Blomquist CL, Kirkpatrick BC. (2002) Identification of phytoplasma taxa and insect vectors of peach yellow leaf roll disease in California. Plant Dis. 86: 759–763.
  • Deng S, Hiruki C (1991) Genetic relatedness between two nonculturable Mycoplasmalike organisms revealed by nucleic acid hybridization and polymerase chain reaction. Phytopathol 81: 1475-1479.
  • Fialová R, Navrátil M, Válová P, Lauterer P, Kocourek F, Poncarová-Voráčková Z. (2004) Epidemiology of European stone fruit yellows phytoplasma in the Czech Republic. Acta Hortic. 657: 483–487.
  • Gundersen DE, Lee IM, Rehner SA, Davis RE, Kingsbury DT. (1994) Phylogeny of mycoplasmalike organisms (phytoplasmas): a basis for their classification. J bacteriol 176: 5244-5254.
  • Gundersen DE, Lee IM (1996) Ultrasensitive detection of phytoplasmas by nested-PCR assays using two universal primer pairs. Phytopathol Mediterr 35: 144-151.
  • Heinrich M, Botti S, Caprara L, Arthofer W, Strommer S, Hanzer V, Katinger H, Bertaccini A, Machado M (2001) Improved detection methods for fruit tree phytoplasmas. Plant Molec Biol Rep 19: 169-179.
  • Jones P, Arocha Y, Antesana O, Montilliano E, Franco P. (2005) First report of an isolate of ‘Candidatus Phytoplasma australiense’ associated with a yellow leaf roll disease of peach (Prunus persicae) in Bolivia. Plant Pathol. 54: 558.
  • Lee IM, Davis RE, Gundersen-Rindal DE (2000) Phytoplasma: Phytopathogenic Mollicutes. Ann Revie in Microbiol 54: 221-255.
  • Lorenz K, Schneider B, Ahrens U. and Seemüller E (1995) Detection of the apple proliferation and pear decline phytoplasmas by PCR amplification of ribosomal and nonribosomal DNA. Phytopathol 85: 771-776.
  • Molino Lova M, Quaglino F, Abou-Jawdah Y, Choueiri E, Sobh H, Casati P, Tedeschi R, Alma A, Bianco PA (2011). Identification of new 16SrIX subgroups, -F and -G, among 'Candidatus Phytoplasma phoenicium' strains infecting almond, peach and nectarine in Lebanon. Phytopathol Mediter. 50: 273- 282.
  • Murray M, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nuc Acids Rese 8: 4321- 4326.
  • Navràtil M, Válová P, Fialová R, Petrová K, Fránová J, Nebesářová J, Poncarová-Voráčková Z, Karešová R (2001) Survey for stone fruit phytoplasmas in Czech Republic. Acta Hortic 550: 377-382.
  • Olmos A, Cambra M, Esteban O, Gorris MT, Terrada E (1999) New device and method for capture, reverse transcription and nested PCR in a single closed-tube. Nuc Aci Rese 27:1564-5.
  • Paltrinieri S, Martini M, Stefani E, Pondrelli M, Fideghelli C, Bertaccini A (2001). Phytoplasma infection in peach and cherry in Italy. Acta Hortic 550: 365–370.
  • Salehi M, Izadpanah K, Nejat N (2006). A new phytoplasma infecting lettuce in Iran. Plant Dis. 90: 247.
  • Salehi M, Haghshenas F, Khanchezar A, Esmailzadeh-Hosseini SA (2011). Association of ‘Candidatus Phytoplasma phoenicium’ with GF-677 witches’ broom in Iran. Bul Insect. 64: S113–4.
  • Schneider B, Ahrens U, Kirkpatrick BC, Seemüller E (1993) Classification of plant-pathogenic mycoplasmalike organisms using restriction-site analysis of PCR-amplified 16s rDNA. J Gener Microbiol 139: 519- 527.
  • Schneider B, Seemuller E, Smart CD, Kirkpatrick BC (1995) Phylogenetic classification of plant pathogenic mycoplasma like organisms or phytoplasmas. In: Razin S, Tully, JG Eds., Molecular and Diagnostic Procedures in Mycoplasmology, Vol. I. Academic Press, San Diego, 369-380.
  • Seemüller E, Schneider B (2004) Taxonomic description of ‘Candidatus Phytoplasma mali’ sp. nov., ‘Candidatus Phytoplasma pyri’ sp. nov., ‘Candidatus Phytoplasma prunorum’ sp. nov., the causal agents of Apple proliferation, Pear decline and European stone fruit yellows, respectively. Int J Syst Evol Microbiol. 54: 1217–1226.
  • Seemüller E, Schneider B, Maurer R, Ahrens U, Daire X, Kison H, Lorenz K, Firrao,G, Avinent L, Sears BB Stackebrandt E (1994) Phylogenetic Classification of Phytopathogenic Mollicutes by Sequence Analysis of 16S Ribosomal DNA. Int J Syst Evol Microbiol. 44, 440-446.
  • Smart C, Schneider B, Blomquist C, Guerra L, Harrison N, Ahrens U, Lorenz K, Seemüller E, Kirkpatrick B (1996) Phytoplasma-specific PCR primers based on sequences of the 16S-23S rRNA spacer region. Appl Envir Microbiol. 62: 2988-2993.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, Evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 28: 2731 -2739.
  • Thakur PD, Handa A, Chowfla SC, Krczal G (1998) Outbreak of a phytoplasma disease of peach in the Northwestern Himalayas of India. Acta Hortic. 472: 737-742.
  • Tsai JH (1979) Vector transmission of mycoplasmal agents of plant diseases. In The Mycoplasmas III, Plant and Insect Mycoplasmas, pp. 265–307. Edited by R. F. Whitcomb & J. G. Tully. New York: Academic Press.
  • Zhao Y, Wei W, Lee IM, Shao J, Suo X, Davis RE (2009) Construction of an interactive online phytoplasma classification tool, iphyclassifier, and its application in analysis of the peach X-disease phytoplasmas group (16SrIII). Int J Syst Evol Microbiol. 59: 2582-2593.
  • Zirak L, Bahar M, Ahoonmanesh A (2009) Molecular characterization of phytoplasmas related to peanut witches' broom and stolbur groups infecting plum in Iran. J Plant Pathol 91: 713-716.
  • Zirak L, Bahar M, Ahoonmanesh A (2010) Molecular characterization of phytoplasmas associated with peach diseases in Iran. J Phytopathol 158: 105-110.
APA ALLAHVERDI T, RAHIMIAN H, RASTGOU M (2018). Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. , 150 - 158.
Chicago ALLAHVERDI Touhid,RAHIMIAN Heshmatollah,RASTGOU Mina Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. (2018): 150 - 158.
MLA ALLAHVERDI Touhid,RAHIMIAN Heshmatollah,RASTGOU Mina Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. , 2018, ss.150 - 158.
AMA ALLAHVERDI T,RAHIMIAN H,RASTGOU M Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. . 2018; 150 - 158.
Vancouver ALLAHVERDI T,RAHIMIAN H,RASTGOU M Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. . 2018; 150 - 158.
IEEE ALLAHVERDI T,RAHIMIAN H,RASTGOU M "Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran." , ss.150 - 158, 2018.
ISNAD ALLAHVERDI, Touhid vd. "Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran". (2018), 150-158.
APA ALLAHVERDI T, RAHIMIAN H, RASTGOU M (2018). Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi, 28(5), 150 - 158.
Chicago ALLAHVERDI Touhid,RAHIMIAN Heshmatollah,RASTGOU Mina Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi 28, no.5 (2018): 150 - 158.
MLA ALLAHVERDI Touhid,RAHIMIAN Heshmatollah,RASTGOU Mina Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi, vol.28, no.5, 2018, ss.150 - 158.
AMA ALLAHVERDI T,RAHIMIAN H,RASTGOU M Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi. 2018; 28(5): 150 - 158.
Vancouver ALLAHVERDI T,RAHIMIAN H,RASTGOU M Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran. Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi. 2018; 28(5): 150 - 158.
IEEE ALLAHVERDI T,RAHIMIAN H,RASTGOU M "Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran." Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi, 28, ss.150 - 158, 2018.
ISNAD ALLAHVERDI, Touhid vd. "Peach and Nectarine Affected with 16SrXII and 16SrIX Phytoplasma Groups in Northern Provinces of Iran". Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi 28/5 (2018), 150-158.