Yıl: 2019 Cilt: 25 Sayı: 2 Sayfa Aralığı: 251 - 256 Metin Dili: İngilizce DOI: 10.9775/kvfd.2018.20819 İndeks Tarihi: 03-06-2020

Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders

Öz:
Bovine respiratory disease (BRD) causes economic losses related to a reduction in weight gain of affected animals, veterinary treatment costs,death, etc. One of the important respiratory tract disease viruses is the bovine respiratory syncytial virus (BRSV). In this study, it is aimed toreport the molecular characterization of detected BRSVs. Therefore, nasal samples from three calves in a herd seen severe respiratory disorderswere examined for BRSV and other possible viral etiological agents by PCRs and the amplicons were sequenced. In the phylogenetic tree,BRSV circulating in this herd is clustered with the genetic subgroup III BRSVs deposited in GenBank from some other countries. This study onthe molecular characterization of BRSV circulating in calves would contribute for future studies on the epidemiology of this infection and thedevelopment and/or choice the effective vaccines in Turkey.
Anahtar Kelime:

Solunum Sistemi Hastalığı Olan Buzağılarda Saptanan Bovine Respiratory Syncytial Virusun Filogenetik Analizi

Öz:
Sığırlarda solunum sistemi hastalıkları, etkilenen hayvanların kilo alımında azalma, veteriner tedavi masrafları, ölüm gibi sebeplerle ekonomik kayıplara neden olmaktadır. Bovine Respiratory Syncytial Virus (BRSV), solunum sistemini etkileyen viral etkenlerin başında gelmektedir. Bu çalışmada BRSV’nin saptanması ve tespit edilen etkenlerin moleküler karakterizasyonlarının ortaya konulması amaçlanmıştır. Bu amaçla, buzağılarda ağır solunum yolu sistemi bulguları gözlenen bir işletmedeki üç buzağıdan alınan burun akıntısı örnekleri BRSV ve diğer viral etkenler yönünden PCR ile test edilmiştir. RT-PCR sonucunda pozitif bulunan örneklerin dizin bilgileri elde edilmiştir. Yapılan filogenetik analiz sonucunda bu sürüde tespit edilen BRSV’nin genetik olarak subgrup III içerisinde yer aldığı ortaya konulmuştur. Buzağılarda saptanan BRSV’nin moleküler karakterizasyonu üzerine yapılan bu çalışma, bu enfeksiyonun epidemiyolojisi ve etkili aşıların geliştirilmesi ve/veya seçimiyle ilgili gelecekteki çalışmalara katkıda bulunacaktır.
Anahtar Kelime:

Belge Türü: Makale Makale Türü: Araştırma Makalesi Erişim Türü: Erişime Açık
  • 1. Socha W, Larska M, Rola J: Molecular characterisation of the first polish isolates of bovine respiratory syncytial virus. Bull Vet Inst Pulawy, 53, 569- 574, 2009.
  • 2. Alkan F, Ozkul A, Bilge Dagalp S, Yesilbag K, Oguzoglu TC, Akça Y, Burgu I: Virological and serological studies on the role of PI-3 virus, BRSV, BVDV and BHV-1 on respiratory infections of cattle. I. The detection of etiological agents by direct immunofluorescence technique. Dtsch Tierarztl Wochenschr, 107 (5): 193-195, 2000.
  • 3. Klem TB, Kjæstad HP, Kummen E, Holen H, Stokstad M: Bovine respiratory syncytial virus outbreak reduced bulls’ weight gain and feed conversion for eight months in a Norwegian beef herd. Acta Vet Scand, 58: 8, 2016. DOI: 10.1186/s13028-016-0190-y
  • 4. Larsen LE, Tjørnehøj K, Viuff B: Extensive sequence divergence among bovine respiratory syncytial viruses isolated during recurrent outbreaks in closed herds. J Clin Microbiol, 38 (11): 4222-4227, 2000.
  • 5. Valarcher JF, Taylor G: Bovine respiratory syncytial virus infection. Vet Res, 38 (2): 153-180, 2007. DOI: 10.1051/vetres:2006053
  • 6. Prozzi D, Walravens K, Langedijk JPM, Daus F, Kramps JA, Letesson JJ: Antigenic and molecular analyses of the variability of bovine respiratory syncytial virus G glycoprotein. J Gen Virol, 78 (2): 359-366, 1997. DOI: 10.1099/0022-1317-78-2-359
  • 7. Schrijver RS, Daus F, Kramps JA, Langedijk JPM, Buijs R, Middel WGJ, Taylor G, Furze J, Huyben MWC, van Oirschot JT: Subgrouping of bovine respiratory syncytial virus strains detected in lung tissue. Vet Microbiol, 53 (3-4): 253-260, 1996. DOI: 10.1016/S0378-1135(96)01223-0
  • 8. Bertolotti L, Giammarioli M, Rosati S: Genetic characterization of bovine respiratory syncytial virus strains isolated in Italy: Evidence for the circulation of new divergent clades. J Vet Diagn Invest, 30 (2): 300-304, 2018. DOI: 10.1177/1040638717746202
  • 9. Valarcher JF, Schelcher F, Bourhy H: Evolution of bovine respiratory syncytial virus. J Virol, 74 (22): 10714-10728, 2000. DOI: 10.1128/JVI.74.22. 10714-10728.2000
  • 10. Yeşilbağ K, Güngör B: Seroprevalence of bovine respiratory viruses in North-Western Turkey. Trop Anim Health Prod, 40 (1): 55-60, 2008. DOI: 10.1007/s11250-007-9053-x
  • 11. Burgu I, Toker A, Akca Y, Alkan F: A seroepidemiologic study of bovine respiratory syncytial virus (BRSV) in Turkey. Dtsch Tierarztl Wochenschr, 97 (2): 88-89, 1990.
  • 12. Cho KO, Hasoksuz M, Nielsen PR, Chang KO, Lathrop S, Saif LJ: Cross-protection studies between respiratory and calf diarrhea and winter dysentery coronavirus strains in calves and RT-PCR and nested PCR for their detection. Arch Virol, 146 (12): 2401-2419, 2001. DOI: 10.1007/ s007050170011
  • 13. Esteves PA, Dellagostin OA, Pinto LS, Silva AD, Spilki FR, CiacciZanella JR, Hübner SO, Puentes R, Maisonnave J, Franco AC, Rijsewijk FAM, Batista HBCR, Teixeira TF, Dezen D, Oliveira AP, David C, Arns CW, Roehe PM: Phylogenetic comparison of the carboxy-terminal region of glycoprotein C (gC) of bovine herpesviruses (BoHV) 1.1, 1.2 and 5 from South America (SA). Virus Res, 131 (1): 16-22, 2008. DOI: 10.1016/j. virusres.2007.08.004
  • 14. Vilček S, Herring AJ, Herring JA, Nettleton PF, Lowings JP, Paton DJ: Pestiviruses isolated from pigs, cattle and sheep can be allocated into at least three genogroups using polymerase chain reaction and restriction endonuclease analysis. Arch Virol, 136 (3-4): 309-323, 1994. DOI: 10.1007/ BF01321060
  • 15. Vilček S, Elvander M, Ballagi-Pordany A, Belak S: Development of nested PCR assays for detection of bovine respiratory syncytial virus in clinical samples. J Clin Microbiol, 32 (9): 2225-2231, 1994.
  • 16. Maidana SS, Lomonaco PM, Combessies G, Craig MI, Diodati J, Rodriguez D, Parreno V, Zabal O, Konrad JL, Crudelli G, Mauroy A, Thiry E, Romera SA: Isolation and characterization of bovine parainfluenza virus type 3 from water buffaloes (Bubalus bubalis) in Argentina. BMC Vet Res, 8 (1): 83, 2012. DOI: 10.1186/1746-6148-8-83
  • 17. Edgar RC: MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res, 32 (5): 1792-1797, 2004. DOI: 10.1093/nar/gkh340
  • 18. Larsson A: AliView: A fast and lightweight alignment viewer and editor for large datasets. Bioinformatics, 30 (22): 3276-3278, 2014. DOI: 10.1093/ bioinformatics/btu531
  • 19. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S: MEGA6: Molecular evolutionary genetics analysis version 6.0. Mol Biol Evol, 30 (12): 2725-2729, 2013. DOI: 10.1093/molbev/mst197
  • 20. Contreras-Luna MJ, Ramírez-Martínez LA, Sarmiento Silva RE, Cruz Lazo C, Pérez Torres A, Sánchez-Betancourt JI: Evidence of respiratory syncytial virus and parainfluenza-3 virus in Mexican sheep. Virusdisease, 28 (1): 102-110, 2017. DOI: 10.1007/s13337-016-0354-4
  • 21. Affonso IB, De Souza A, Martini MC, Dos Santos MMAB, Spilki FR, Arns CW, Samara SI: Detection of an untyped strain of bovine respiratory syncytial virus in a dairy herd. Semin Agrar, 35 (5): 2539-2550, 2014. DOI: 10.5433/1679-0359.2014v35n5p2539
  • 22. Bidokhti MRM, Tråvén M, Ohlson A, Zarnegar B, Baule C, Belák S, Alenius S, Liu L: Phylogenetic analysis of bovine respiratory syncytial viruses from recent outbreaks in feedlot and dairy cattle herds. Arch Virol, 157 (4): 601-607, 2012. DOI: 10.1007/s00705-011-1209-3
  • 23. Yaegashi G, Seimiya YM, Seki Y, Tsunemitsu H: Genetic and antigenic analyses of bovine respiratory syncytial virus detected in Japan. J Vet Med Sci, 67 (2): 145-150, 2005. DOI: 10.1292/jvms.67.145
  • 24. Nettleton PF, Gilray JA, Caldow G, Gidlow JR, Durkovic B, Vilcek S: Recent isolates of Bovine respiratory syncytial virus from Britain are more closely related to isolates from USA than to earlier British and current mainland European isolates. J Vet Med B, 50 (4): 196-199, 2003. DOI: 10.1046/ j.1439-0450.2003.00647.x
  • 25. Klem TB, Rimstad E, Stokstad M: Occurrence and phylogenetic analysis of bovine respiratory syncytial virus in outbreaks of respiratory disease in Norway. BMC Vet Res, 10 (1): 15, 2014. DOI: 10.1186/1746-6148-10-15
  • 26. Larsen LE, Tegtmeier C, Pedersen E: Bovine respiratory syncytial virus (BRSV) pneumonia in beef calf herds despite vaccination. Acta Vet Scand, 42 (1): 113-121, 2001. DOI: 10.1186/1751-0147-42-113
  • 27. Langedijk JP, Meloen RH, Taylor G, Furze JM, van Oirschot JT: Antigenic structure of the central conserved region of protein G of bovine respiratory syncytial virus. J Virol, 71 (5): 4055-4061, 1997.
  • 28. Furze JM, Roberts SR, Wertz GW, Taylor G: Antigenically distinct G glycoproteins of BRSV strains share a high degree of genetic homogeneity. Virology, 231 (1): 48-58, 1997. DOI: 10.1006/viro.1997.8490
  • 29. van der Poel WH, Kramps JA, Middel WG, van Oirschot JT, Brand, A: Dynamics of bovine respiratory syncytial virus infections: A longitudinal epidemiological study in dairy herds. Arch Virol, 133 (3-4): 309-321, 1993.
APA Karayel-Hacioglu I, Coşkun N, DURAN YELKEN S, SEVİNÇ S, Alkan F (2019). Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. , 251 - 256. 10.9775/kvfd.2018.20819
Chicago Karayel-Hacioglu Ilke,Coşkun Nüvit,DURAN YELKEN Selda,SEVİNÇ Seçil,Alkan Feray Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. (2019): 251 - 256. 10.9775/kvfd.2018.20819
MLA Karayel-Hacioglu Ilke,Coşkun Nüvit,DURAN YELKEN Selda,SEVİNÇ Seçil,Alkan Feray Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. , 2019, ss.251 - 256. 10.9775/kvfd.2018.20819
AMA Karayel-Hacioglu I,Coşkun N,DURAN YELKEN S,SEVİNÇ S,Alkan F Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. . 2019; 251 - 256. 10.9775/kvfd.2018.20819
Vancouver Karayel-Hacioglu I,Coşkun N,DURAN YELKEN S,SEVİNÇ S,Alkan F Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. . 2019; 251 - 256. 10.9775/kvfd.2018.20819
IEEE Karayel-Hacioglu I,Coşkun N,DURAN YELKEN S,SEVİNÇ S,Alkan F "Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders." , ss.251 - 256, 2019. 10.9775/kvfd.2018.20819
ISNAD Karayel-Hacioglu, Ilke vd. "Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders". (2019), 251-256. https://doi.org/10.9775/kvfd.2018.20819
APA Karayel-Hacioglu I, Coşkun N, DURAN YELKEN S, SEVİNÇ S, Alkan F (2019). Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. Kafkas Üniversitesi Veteriner Fakültesi Dergisi, 25(2), 251 - 256. 10.9775/kvfd.2018.20819
Chicago Karayel-Hacioglu Ilke,Coşkun Nüvit,DURAN YELKEN Selda,SEVİNÇ Seçil,Alkan Feray Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. Kafkas Üniversitesi Veteriner Fakültesi Dergisi 25, no.2 (2019): 251 - 256. 10.9775/kvfd.2018.20819
MLA Karayel-Hacioglu Ilke,Coşkun Nüvit,DURAN YELKEN Selda,SEVİNÇ Seçil,Alkan Feray Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. Kafkas Üniversitesi Veteriner Fakültesi Dergisi, vol.25, no.2, 2019, ss.251 - 256. 10.9775/kvfd.2018.20819
AMA Karayel-Hacioglu I,Coşkun N,DURAN YELKEN S,SEVİNÇ S,Alkan F Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. Kafkas Üniversitesi Veteriner Fakültesi Dergisi. 2019; 25(2): 251 - 256. 10.9775/kvfd.2018.20819
Vancouver Karayel-Hacioglu I,Coşkun N,DURAN YELKEN S,SEVİNÇ S,Alkan F Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders. Kafkas Üniversitesi Veteriner Fakültesi Dergisi. 2019; 25(2): 251 - 256. 10.9775/kvfd.2018.20819
IEEE Karayel-Hacioglu I,Coşkun N,DURAN YELKEN S,SEVİNÇ S,Alkan F "Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders." Kafkas Üniversitesi Veteriner Fakültesi Dergisi, 25, ss.251 - 256, 2019. 10.9775/kvfd.2018.20819
ISNAD Karayel-Hacioglu, Ilke vd. "Phylogenetic Analysis of Bovine Respiratory Syncytial Virus from Calves with Respiratory Disorders". Kafkas Üniversitesi Veteriner Fakültesi Dergisi 25/2 (2019), 251-256. https://doi.org/10.9775/kvfd.2018.20819