Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey

Ayşe Banu DEMİR, (İzmir Ekonomi Üniversitesi, Tıp Fakültesi, Tıbbi Biyoloji Anabilim Dalı, İzmir, Türkiye)
Domenico BENVENUTO, (Unit of Medical Statistics and Molecular Epidemiology, University Campus Bio-Medico of Rome, Rome, Italy)
Hakan ABACIOĞLU, (İzmir Ekonomi Üniversitesi, Tıp Fakültesi, Tıbbi Mikrobiyoloji Anabilim Dalı, İzmir, Türkiye)
Silvia ANGELETTI, (Unit of Clinical LaboratoryScience, University Campus Bio-Medico of Rome, Rome, Italy)
Massimo CICCOZZI (Unit of Medical Statistics and Molecular Epidemiology, University Campus Bio-Medico of Rome, Rome, Italy)
Turkish Journal of Biology
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Yıl: 2020 Cilt: 44 Sayı: 3 Sayfa Aralığı: 178 - 184 Metin Dili: İngilizce DOI: 10.3906/biy-2005-69 İndeks Tarihi: 06-07-2022

Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey

Öz:
A previously unknown coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has been shown to cause coronavirus disease 2019 (COVID-19) pandemic. The first case of COVID-19 in Turkey has been declared in March 11th, 2020 and from there on, more than 150,000 people in the country have been diagnosed with the disease. In this study, 62 viral sequences from Turkey, which have been uploaded to GISAID database, were analyzed by means of their nucleotide substitutions in comparison to the reference SARS-CoV-2 genome from Wuhan. Our results indicate that the viral isolates from Turkey harbor some common mutations with the viral strains from Europe, Oceania, North America and Asia. When the mutations were evaluated, C3037T, C14408T and A23403G were found to be the most common nucleotide substitutions among the viral isolates in Turkey, which are mostly seen as linked mutations and are part of a haplotype observed high in Europe.
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APA Demir A, Benvenuto D, Abacioglu H, Angeletti S, ciccozzi m (2020). Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. , 178 - 184. 10.3906/biy-2005-69
Chicago Demir Ayse Banu,Benvenuto Domenico,Abacioglu Hakan,Angeletti Silvia,ciccozzi massimo Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. (2020): 178 - 184. 10.3906/biy-2005-69
MLA Demir Ayse Banu,Benvenuto Domenico,Abacioglu Hakan,Angeletti Silvia,ciccozzi massimo Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. , 2020, ss.178 - 184. 10.3906/biy-2005-69
AMA Demir A,Benvenuto D,Abacioglu H,Angeletti S,ciccozzi m Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. . 2020; 178 - 184. 10.3906/biy-2005-69
Vancouver Demir A,Benvenuto D,Abacioglu H,Angeletti S,ciccozzi m Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. . 2020; 178 - 184. 10.3906/biy-2005-69
IEEE Demir A,Benvenuto D,Abacioglu H,Angeletti S,ciccozzi m "Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey." , ss.178 - 184, 2020. 10.3906/biy-2005-69
ISNAD Demir, Ayse Banu vd. "Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey". (2020), 178-184. https://doi.org/10.3906/biy-2005-69
APA Demir A, Benvenuto D, Abacioglu H, Angeletti S, ciccozzi m (2020). Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. Turkish Journal of Biology, 44(3), 178 - 184. 10.3906/biy-2005-69
Chicago Demir Ayse Banu,Benvenuto Domenico,Abacioglu Hakan,Angeletti Silvia,ciccozzi massimo Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. Turkish Journal of Biology 44, no.3 (2020): 178 - 184. 10.3906/biy-2005-69
MLA Demir Ayse Banu,Benvenuto Domenico,Abacioglu Hakan,Angeletti Silvia,ciccozzi massimo Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. Turkish Journal of Biology, vol.44, no.3, 2020, ss.178 - 184. 10.3906/biy-2005-69
AMA Demir A,Benvenuto D,Abacioglu H,Angeletti S,ciccozzi m Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. Turkish Journal of Biology. 2020; 44(3): 178 - 184. 10.3906/biy-2005-69
Vancouver Demir A,Benvenuto D,Abacioglu H,Angeletti S,ciccozzi m Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey. Turkish Journal of Biology. 2020; 44(3): 178 - 184. 10.3906/biy-2005-69
IEEE Demir A,Benvenuto D,Abacioglu H,Angeletti S,ciccozzi m "Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey." Turkish Journal of Biology, 44, ss.178 - 184, 2020. 10.3906/biy-2005-69
ISNAD Demir, Ayse Banu vd. "Identification of the nucleotide substitutions in 62 SARS-CoV-2 sequences from Turkey". Turkish Journal of Biology 44/3 (2020), 178-184. https://doi.org/10.3906/biy-2005-69
Sayfa Oluşturulma Tarihi
23-04-2024 23:51

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