Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars

Yıl: 2020 Cilt: 60 Sayı: 2 Sayfa Aralığı: 37 - 44 Metin Dili: İngilizce DOI: 10.16955/bitkorb.639801 İndeks Tarihi: 25-11-2020

Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars

Öz:
Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 is a multihost plantpathogenic bacterium all over the world and also in Turkey. The aim of this studywas to identify the pathogenic bacteria causing the symptoms of water-soakednecrotic leaf spots, dark brown spots on leaves, tip burn of leaf in curly type lettuce(Lactuca sativa var. crispy) grown in the field conditions in Beypazarı regionand to reveal the reactions of some lettuce cultivars against the bacteria. For thispurpose, twelve isolates were obtained from 4 different locations. Pathogenicitytests were conducted on curly type lettuce and all isolates were found pathogenicon the host. Isolated bacteria were evaluated for Gram reaction, LOPAT tests,colony morphology on King’s Medium B and carbon sources utilization byVITEK-2 system and identified as Pseudomonas viridiflava. The 16S rDNA regionof a selected isolate representing the similar isolates in all tests was sequenced forgenetic confirmation and the obtained sequence was submitted to the GeneBankunder the accession number MN_539659. The result of the obtained sequence was99.75% similar to the respective reference sequence after BLAST analysis. Reactionof the three different widely produced lettuce types, iceberg, curly and romainetypes, with ten varieties against the causative bacterial agent was evaluated andthe difference between the varieties found significant statistically. In this study, P.viridiflava was detected in lettuce in Central Anatolia for the first time.
Anahtar Kelime:

Marul yaprak lekesi etmeni Pseudomonas viridiflava (Burkholder 1930) Dowson’nın tespiti ve bazı marul çeşitlerinin reaksiyonlarının belirlenmesi

Öz:
Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 tüm dünyada ve Türkiye’de çok konukçulu bitki patojeni bir bakteridir. Beypazarı ilçesinde tarla koşullarında yetiştirilen kıvırcık tip marullarda sulumsu nekrotik lekeler, yapraklarda koyu kahverengi lekeler ve yaprak uçlarında yanıklık belirtileri bakterinin saptanması için incelenmiştir. Dört farklı tarladan 12 izolat elde edilmiştir. Patojenite testleri kıvırcık tip marul üzerinde yapılmış ve ele alınan tüm izolatlar konukçusu üzerinde patojen bulunmuştur. İzole edilen bakteriler Gram reaksiyonu, LOPAT testleri, King B besi yerinde oluşturduğu koloni morfolojisi ve VITEK-2 sistemi ile karbon kaynakları kullanımı yönüyle değerlendirilmiş ve P. viridiflava olarak tespit edilmişlerdir. Tüm testlerde benzerlik gösteren izolatları temsilen seçilen bir izolatın 16S rDNA bölgesi genetik doğrulama için sekanslanmış ve elde edilen dizi GenBank’a MN_539659 kodu ile kaydedilmiştir. Elde edilen sekans dizisinin sonucu BLAST analizi sonrası referans dizi ile %99.75 benzerlik oranı göstermiştir. Yaygın olarak üretimi yapılan iceberg, kıvırcık ve yedikule tipi üç farklı marul tipinden toplam on çeşit ile etmene karşı çeşitlerin reaksiyonu değerlendirilmiş olup çeşitler arasındaki fark istatistiksel olarak önemli bulunmuştur. Bu çalışma ile İç Anadolu Bölgesi’nde P.viridiflava marullarda ilk kez tespit edilmiştir.
Anahtar Kelime:

Belge Türü: Makale Makale Türü: Araştırma Makalesi Erişim Türü: Erişime Açık
  • Aksoy H.M., Ozturk M., Kilic N., 2018. First report on Pseudomonas viridiflava causing bacterial leaf spot of curly lettuce in Turkey. Journal Plant Pathology, 100 (1), 121.
  • Aysan Y., Mirik M., Ala A., Sahin F., Cinar O., 2003 First report of Pseudomonas viridiflava on melon in Turkey. Journal of Plant Pathology, 52 (6), 800.
  • Aysan Y., Şahin S., Ülke G., Sahin F., 2003. Bacterial rot of lettuce caused by Pseudomonas cichorii in Turkey, Plant Pathology, 52 (6), 782.
  • Aysan Y., Uygur S., 2005. Ephytic survival of Pseudomonas viridiflava, causal agent of pith necrosis of tomato on weeds in Turkey. Journal of Plant Pathology, 87 (2), 135-139.
  • Bartoli C., Berge O., Monteil C.L., Guilbaud C., Balestra G.M., et al. 2014. The Pseudomonas viridiflava phylogroups in the P. syringae species complex are characterized by genetic variability and phenotypic plasticity of pathogenicity-related traits. Environmental Microbiology, 16 (7), 2301-2315.
  • Burkholder W.H., 1930. The bacterial diseases of the bean. Memoirs. Cornell University Agricultural Experiment Station, 127, 1-88 p.
  • Gonzalez A.J., Rodicio M.R., Mendoza M.C., 2013. Identification of an emergent and atypical Pseudomonas viridiflava lineage causing bacteriosis in plants of agronomic importance in a Spanish region. Applied and Environmental Microbiology, 69 (5), 2936-2941.
  • Goumans D.E., Chatzaki A.K., 1998. Characterization and host range evaluation of Pseudomonas viridiflava from melon, blite, tomato, chrysanthemum and eggplant. European Journal of Plant Pathology, 104, 181–188.
  • King E.O., Ward M.K., Raney D.E., 1954. Two simple media for the demonstration of pyocyanine and fluorescin. Journal of Laboratory of Clinical Medicine, 44 (2), 301–307.
  • Lelliott R.A., Billing E., Hayward A.C., 1966. A determinative scheme for the fluorescent plant pathogenic Pseudomonads. Journal of Applied Microbiology, 29 (3), 470–489.
  • Sahin F., 2000. First report of bacterial spot of lettuce caused by Xanthomonas campestris pv. vitians in Turkey. Plant Disease, 84 (4), 490.
  • Marchesi J.S, Sato T., J. Weightman A.J., Martin T.A., Fry J.C., Hiom S.J., Wade W.G., 1998. Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S-rRNA. Applied and Environmental Microbiology, 64 (2), 795-799.
  • Minitab lnc., 2017. Minitab Statistic Software Version 16.0. Philadelphia, USA.
  • Mirik M., Aysan Y., Cetinkaya Yildiz R., Sahin F., Saygili H., 2004a. Watermelon is a new host of Pseudomonas viridiflava causal agent of leaf and stem necrosis, discovered in Turkey. Plant Disease, 88 (8), 907.
  • Mirik M., Aysan Y., Yıldız R.Ç., Sahin F., Kotan R., 2004b. An outbreak of bacterial leaf spot disease, caused by Xanthomonas axonopodis pv. vitians, on lettuce in the Mediterranean region of Turkey. 3 rd Balkan Symposium on Vegetables and Potatoes, 6-10 September, 2004, Bursa, Turkey. Acta Horticulturae 729, 445-447.
  • Mirik M., Aysan Y., Sahin F., 2011. Characterization of Pseudomonas cichorii isolated from different hosts in Turkey. International Journal of Agriculture and Biology, 13 (2), 203–209.
  • Sanver U., Pazarlar S., Cetinkaya N., Ozaktan H., 2019. First report of Pseudomonas viridiflava causing bacterial blight on globe artichoke in Turkey. Plant Disease, 103 (8), 2123.
  • Schaad N.W., 2001. Initial identification of common genera. Schaad N., Jones J.B. and Chun W., (Eds.). Laboratory Guide for Identification of Plant Pathogenic Bacteria, Third Edition, APS Press. ST. Paul, Minnesota, 7-9 p.
  • Sahin F., 2000. First report of bacterial spot of lettuce caused by Xanthomonas campestris pv. vitians in Turkey. Plant Disease, 84 (4), 490.
  • Sarris P.F., Trantas E.A., Mpalantinaki E., Ververidis F., Goumas D.E., 2012. Pseudomonas viridiflava, a multi host plant pathogen with significant genetic variation at the molecular level. PLoS ONE 7(4): e36090.
  • Soylu S., Sertkaya E., Üremiş İ. , Bozkurt İ., Kurt Ş., 2017.Hatay ili marul (Lactuca sativa L.) ekim alanlarında görülen önemli hastalık etmenleri, zararlı ve yabancı ot türleri ve yaygınlık durumları. Mustafa Kemal Üniversitesi Ziraat Fakültesi Dergisi, 22 (1), 23-33.
  • TUIK, 2018. Bitkisel üretim istatistikleri. https://biruni.tuik. gov.tr/medas/?kn=92&locale=tr. (Accessed date: 25.09.2019) Thirthamallappa and Lohithaswa H.C., 2000. Genetics of resistance to early blight (Alternaria solani Sorauer) in tomato (Lycopersicon esculentum L.). Euphytica, 113, 187–193.
  • Ustun N., 2012. Bacterial blight and pith necrosis of eggplant in Turkey. Journal of Plant Pathology, 94 (2), 437-441.
  • Ustun N., Saygili H., 2001. Pith necrosis on greenhouse tomatoes in Aegean region of Turkey. 11th Congress of the Mediterranean Phytopathological Union and 3rd Congress of the Sociedade Portuguesa de Fitopatologia, Evora, Portugal. 70–73 p.
  • Viriyasuthee W., Saepaisan S., Saksirirat W., Gleason M.L., Chen R.S., Jogloy S., 2019. Effective plant ages for screening for field resistance to Alternaria leaf spot (caused by Alternaria spp.) under natural infection in Jerusalem artichoke (Helianthus tuberosus L.). Agronomy, 9 (11), 754 p.
  • Yildiz H.N., Aysan Y., Sahin F., Cinar O., 2004. Potential inoculum sources of tomato stem and pith necrosis caused by Pseudomonas viridiflava in the eastern Mediterranean region of Turkey. Journal of Plant Diseases and Protection, 111 (4), 380-387.
  • Cite this article: Canik Orel, D. (2020). Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Plant Protection Bulletin, 60-2. DOI: 10.16955/bitkorb.639801
  • Atıf için: Canik Orel, D. (2020). Marul yaprak lekesi etmeni Pseudomonas viridiflava (Burkholder 1930) Dowson’nın tespiti ve bazı marul çeşitlerinin reaksiyonlarının belirlenmesi. Bitki Koruma Bülteni, 60-2. DOI: 10.16955/ bitkorb.639801
APA OREL D (2020). Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. , 37 - 44. 10.16955/bitkorb.639801
Chicago OREL Didem CANİK Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. (2020): 37 - 44. 10.16955/bitkorb.639801
MLA OREL Didem CANİK Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. , 2020, ss.37 - 44. 10.16955/bitkorb.639801
AMA OREL D Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. . 2020; 37 - 44. 10.16955/bitkorb.639801
Vancouver OREL D Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. . 2020; 37 - 44. 10.16955/bitkorb.639801
IEEE OREL D "Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars." , ss.37 - 44, 2020. 10.16955/bitkorb.639801
ISNAD OREL, Didem CANİK. "Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars". (2020), 37-44. https://doi.org/10.16955/bitkorb.639801
APA OREL D (2020). Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Bitki Koruma Bülteni, 60(2), 37 - 44. 10.16955/bitkorb.639801
Chicago OREL Didem CANİK Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Bitki Koruma Bülteni 60, no.2 (2020): 37 - 44. 10.16955/bitkorb.639801
MLA OREL Didem CANİK Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Bitki Koruma Bülteni, vol.60, no.2, 2020, ss.37 - 44. 10.16955/bitkorb.639801
AMA OREL D Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Bitki Koruma Bülteni. 2020; 60(2): 37 - 44. 10.16955/bitkorb.639801
Vancouver OREL D Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars. Bitki Koruma Bülteni. 2020; 60(2): 37 - 44. 10.16955/bitkorb.639801
IEEE OREL D "Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars." Bitki Koruma Bülteni, 60, ss.37 - 44, 2020. 10.16955/bitkorb.639801
ISNAD OREL, Didem CANİK. "Determination of bacterial leaf spot of lettuce caused by Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 and the reactions of some lettuce cultivars". Bitki Koruma Bülteni 60/2 (2020), 37-44. https://doi.org/10.16955/bitkorb.639801